通讯作者论文(*): 1. Mao L, Chen J, Lu X, Yang C, Ding Y, Wang M, Zhang Y, Tian Y, Li X, Fu Y, Yang Y, Gu Y, Gao F, Huang J, Liao L*. Proteomic analysis of lung cancer cells reveals a critical role of BCAT1 in cancer cell metastasis. Theranostics. 2021, 11(19):9705-9720 2. Yan K, Yang Y, Zhang Y, Zhao W, Liao L*. Normalization Method Utilizing Endogenous Proteins for Quantitative Proteomics. J Am Soc Mass Spectrom. 2020, 31(7):1380–1388. PMID: 32268065 3. Wan H, Wang Q, Chen X, Zeng Q, Shao Y, Fang H, Liao X*, Li HS, Liu MG, Xu TL, Diao M, Li D, Meng B, Tang B, Zhang Z*, Liao L*. WDR45 contributes to neurodegeneration through regulation of ER homeostasis and neuronal death. Autophagy. 2020, 16(3):531-547. PMID: 31204559 4. Wang T, Wang J, Wang J, Mao L, Tang B, Vanderklish PW, Liao X*, Xiong Z*, Liao L*. HAP1 is an in vivo UBE3A Target that Augments Autophagy in a Mouse Model of Angelman Syndrome. Neurobiology of Disease. 2019, 132:104585.PMID: 31445164 5. Wang J, Lou SS, Wang T, Wu RJ, Li G, Zhao M, Lu B, Li YY, Zhang J, Cheng X, Shen Y, Wang X, Zhu ZC, Li MJ, Takumi T, Yang H, Yu X, Liao L*, Xiong ZQ*. UBE3A-mediated PTPA ubiquitination and degradation regulate PP2A activity and dendritic spine morphology. Proc Natl Acad Sci U S A. 2019, 116(25):12500-12505. PMID: 31160454 6. Wan H, Tang B, Liao X, Zeng Q, Zhang Z, Liao L*. Analysis of neuronal phosphoproteome reveals PINK1 regulation of BAD function and cell death. Cell Death & Diff. 2018, 25:901-917 PMID:29234155 7. Gao Y, Liu X, Tang B, Li C, Kou Z, Li L, Liu W, Wu Y, Kou X, Li J, Zhao Y, Yin J, Wang H, Chen S, Liao L*, Gao S*. Protein Expression Landscape of Mouse Embryos during Pre-implantation Development. Cell Reports. 2017, 21(13):3957-3969. PMID: 29281840 8. Wei W, Mao A, Tang B, Zeng Q, Gao S, Liu X, Lu L, Li W, Du JX, Li J, Wong J*, Liao L*. Large-Scale Identification of Protein Crotonylation Reveals Its Role in Multiple Cellular Functions. J Proteome Res. 2017, 16(4):1743-1752.PMID:28234478 9. Tan GH, Liu YY, Wang L, et al., Liao LJ*, Wu ZY*, Xiong ZQ*. PRRT2 deficiency induces paroxysmal kinesigenic dyskinesia by regulating synaptic transmission in cerebellum. Cell Res. 2018, Jan. 28(1):90-110. 10. Cheng TL, Chen J, Wan H, Tang B, Tian W, Liao L*, Qiu Z*. Regulation of mRNA splicing by MeCP2 via epigenetic modifications in the brain. Sci Rep. 2017, 17;7:42790. PMID: 28211484 11. Tang B, Wang T, Wan H, Han L, Qin X, Zhang Y, Wang J, Yu C, Berton F, Francesconi W, Yates JR, Vanderklish PW, Liao L*. Fmr1 deficiency promotes age-dependent alterations in the cortical synaptic proteome. Proc Natl Acad Sci U S A. 2015, 112(34): E4697-706. PMID:26307763 12. Qin X, Zheng C, Yates JR 3rd, Liao L*. Quantitative phosphoproteomic profiling of PINK1-deficient cells identifies phosphorylation changes in nuclear proteins. Mol BioSyst. 2014, 10(7):1719-29. PMID:24626860 其它代表性论文（#共同第一作者）: 13. Liu Y, Zhang P, Wu Q, Fang H, Wang Y, Xiao Y, Cong M, Wang T, He Y, Ma C, Tian P, Liang Y, Qin LX, Yang Q, Yang Q, Liao L, Hu G. Long non-coding RNA NR2F1-AS1 induces breast cancer lung metastatic dormancy by regulating NR2F1 and ΔNp63. Nat Commun. 2021 Sep 2;12(1):5232. 14. Nakamura T, Oh CK, Liao L, Zhang X, Lopez KM, Gibbs D, Deal AK, Scott HR, Spencer B, Masliah E, Rissman RA, Yates JR 3rd, Lipton SA. Noncanonical transnitrosylation network contributes to synapse loss in Alzheimer's disease. Science. 2021 Jan 15;371(6526):eaaw0843. 15. Xiao X, Liu P, Li D, Xia Z, Wang P, Zhang X, Liu M, Liao L, Jiao B, Ren R. Combination therapy of BCR-ABL-positive B cell acute lymphoblastic leukemia by tyrosine kinase inhibitor dasatinib and c-JUN N-terminal kinase inhibition. J Hematol Oncol. 2020 Jun 18;13(1):80. 16. Dai P, Wang X, Gou LT, Li ZT, Wen Z, Chen ZG, Hua MM, Zhong A, Wang L, Su H, Wan H, Qian K, Liao L, Li J, Tian B, Li D, Fu XD, Shi HJ, Zhou Y, Liu MF. A Translation-Activating Function of MIWI/piRNA during Mouse Spermiogenesis. Cell. 2019 Dec 12;179(7):1566-1581. PMID: 31835033 17. Fang L, Teng H, Wang Y, Liao G, Weng L, Li Y, Wang X, Jin J, Jiao C, Chen L, Peng X, Chen J, Yang Y, Fang H, Han D, Li C, Jin X, Zhang S, Liu Z, Liu M, Wei Q, Liao L, Ge X, Zhao B, Zhou D, Qin HL, Zhou J, Wang P. SET1A-Mediated Mono-Methylation at K342 Regulates YAP Activation by Blocking Its Nuclear Export and Promotes Tumorigenesis. Cancer Cell. 2018, 34(1):103-118.e9. PMID: 30008322 18. Zhao Z, Xu D, Wang Z, Wang L, Han R, Wang Z, Liao L, Chen Y. Hepatic PPARα function is controlled by polyubiquitination and proteasome-mediated degradation through the coordinated actions of PAQR3 and HUWE1. Hepatology. 2018, 1368(1):289-303. PMID:29331071 19. Wang T, Yu Q, Li J, Hu B, Zhao Q, Ma C, Huang W, Zhuo L, Fang H, Liao L, Eugene Chin Y, Jiang Y. O-GlcNAcylation of fumarase maintains tumour growth under glucose deficiency. Nat Cell Biol. 2017, 19(7):833-843. PMID:28628081 20. Xu DQ, Wang Z, Wang CY, et al., Liao LJ, Chen Y. PAQR3 controls autophagy by integrating AMPK signaling to enhance ATG14L-associated PI3K activity. EMBO J. 2016, 35(5):496-514. PMID:26834238 21. Park Y, Jin HS, Lopez J, Lee J, Liao L, Elly C, Liu YC. SHARPIN controls regulatory T cells by negatively modulating the T cell antigen receptor complex. Nat Immunol. 2016 Mar;17(3):286-96. PMID:26829767 22. Okamoto S, Nakamura T, Cieplak P, Chan SF, Kalashnikova E, Liao L, Saleem S, Han X, Clemente A, Nutter A, Sances S, Brechtel C, Haus D, Haun F, Sanz-Blasco S, Huang X, Li H, Zaremba JD, Cui J, Gu Z, Nikzad R, Harrop A, McKercher SR, Godzik A, Yates JR 3rd, Lipton SA.S-nitrosylation-mediated redox transcriptional switch modulates neurogenesis and neuronal cell death. Cell Rep. 2014 Jul 10;8(1):217-28. 23. Li K, Zhou T, Liao L, Yang Z, Wong C, Henn F, Malinow R, Yates JR, Hu H. βCaMKII in Lateral Habenula Mediates Core Symptoms of Depression. Science. 2013;341:1016-1020. 24. Jin HS, Liao L, Park Y, Liu YC. Neddylation pathway regulates T-cell function by targeting an adaptor protein Shc and a protein kinase Erk signaling. Proc Natl Acad Sci U S A. 2013;110(2):624-9 25. Sando R 3rd, Gounko N, Pieraut S, Liao L, Yates JR 3rd, and Maximov A. HDAC4 Governs Transcriptional Programs Essential for Synaptic Development and Function. Cell. 2012; 151(4):821-34 26. Banerjee S, Liao L, Russo R, Nakamura T, McKercher SR, Okamoto S, Haun F, Nikzad R, Zaidi R, Holland E, Eroshkin A, Yates JR 3rd, Lipton SA. Isobaric tagging-based quantification by mass spectrometry of differentially regulated proteins in synaptosomes of HIV/gp120 transgenic mice: Implications for HIV-associated neurodegeneration. Exp Neurol. 2012; 236(2):298-306 27. Liao L, Sando RC, Farnum JB, Vanderklish PW, Maximov A, and Yates JR 3rd. 15N labeled brain enable quantification of proteome and phosphoproteome in neurons. J Proteome Res. 2012; 11(2):1341-53 28. Hart JR, Liao L, Yates JR 3rd, Vogt PK. An essential role of signal transducer and activator of transcription 3 in phosphatidylinositol 3-kinase-induced oncogenic transformation. Proc Natl Acad Sci USA. 2011; 108(32):13247-52 29. Hart JR#, Liao L#, Ueno L, Yates JR 3rd, Vogt PK. Protein expression profiles of C3H 10T1/2 murine fibroblasts and of isogenic cells transformed by the H1047R mutant of phosphoinositide 3-kinase (PI3K). Cell Cycle. 2011; 10(6):971-6 30. Huang H#, Jeon M#, Liao L#, Yang C, Elly C, Yates JR, and Liu YC. K33-Linked Polyubiquitination of T Cell Receptor-ζ Regulates Proteolysis-Independent T Cell Signaling. Immunity. 2010; 33(1):60-70 31. Ramya TNC, Weerapana E, Liao L, Zenga Y, Tatenoa H, Liao L, Hana S, Yates JR, Cravatta BF, and Paulson JC. In situ trans ligands of CD22 identified by glycan-protein photo-cross-linking enabled proteomics. Mol Cell Proteomics. 2010; 9(6):1339-51 32. Liao L#, McClatchy DB#, Yates JR. Primer: shotgun proteomics in neuroscience. (Review) Neuron. 2009; 63(1):12-26 33. Park SK#, Liao L#, Kim JY, and Yates JR. A computational approach to correct arginine-to-proline conversion in quantitative proteomics. Nature Methods. 2009; 6(3):184-185 34. Liao L, Park SK, Xu T, Vanderklish PW, and Yates JR. Quantitative proteomic analysis of primary neurons reveals diverse changes in synaptic protein content in fmr1 knockout mice. Proc Natl Acad Sci USA. 2008; 105(40):15281-6 35. Liao L#, McClatchy DB#, Park SK, Xu T, Lu B and Yates JR. Quantitative analysis of brain nuclear phosphoproteins identifies developmentally regulated phosphorylation events. J Proteome Res. 2008; 7(11):4743-55 36. Denny, P.#, Hagen, F.K.#, Hardt, M.#, Liao, L.#, Yan, W.#, et al. The proteomes of human parotid and submandibular/sublingual gland saliva collected as the ductal secretions. J Proteome Res. 2008, 7(5):1994-2006. (* Co-first author) 37. Xia Q#, Liao L#, Cheng D, Duong D, Gearing M, Lah JJ, Levey AI, and Peng J. Identification of novel kinases and ubiquitin ligases associated with Lewy bodies by comparative proteomics. Frontiers in Bioscience. 2008; 13:3850-6 38. McClatchy DB, Liao L, Park SK, Venable J, and Yates JR. Quantification of the synaptic proteome of the rat cerebellum during postnatal development. Genome Res. 2007; 17(9):1378-88 39. Liao L, Pilotte J, Xu T, Wong CL, Edelman GM, Vanderklish PW, and Yates JR. BDNF induces widespread changes in synaptic protein content and upregulates the translation machinery components: an analysis using high-throughput proteomics. J Proteome Res. 2007; 6(3):1059-71 40. Yates JR, Corciorva D, Liao L, Zabrouscov V. Performance of the LTQ-Orbitrap for peptide analysis. Anal Chem. 2006; 78(2):493-500 41. Liao L, Cheng D, Wang J, Losik T, Duong D, Gearing M, Rees H, Lah JJ, Levey AI, Peng J. Proteomic characterization of postmortem amyloid plaques isolated by laser capture microdissection. J Biol Chem. 2004; 279(35): 37061-8 |
